BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B12LP1|AL428860
(903 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1155 1764 0.0
>3x_Contig1155
Length = 6106
Score = 1764 bits (889), Expect = 0.0
Identities = 900/903 (99%), Gaps = 1/903 (0%)
Strand = Plus / Minus
Query: 1 tacccaattggctaaggagctaggaatcggtaagggtcccgacgcagccgtcggtaagcc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3459 tacccaattggctaaggagctaggattcggtaagggtcccgacgcagccgtcggtaagcc 3400
Query: 61 agacaggaaatccttccagaagaaaaatcgtaataaatcaaacaacaaacgccgttaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3399 agacaggaaatccttccagaagaaaaatcgtaataaatcaaacaacaaacgccgttaatt 3340
Query: 121 cctcttcataagcggaactcgtagtacccacccatccctttaaagaacaaacttcccaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3339 cctcttcataagcggaactcgtagtacccacccatccctttaaagaacaaacttcccaaa 3280
Query: 181 aatgatgtaaaaagaagattttccagatcttctttacaattgttccgtactctcttcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3279 aatgatgtaaaaagaagattttccagatcttctttacaattgttccgtactctcttcttg 3220
Query: 241 tcgcattagttgtatgttatgtaatatatattcaattgatgagtccttgaccactcattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3219 tcgcattagttgtatgttatgtaatatatattcaattgatgagtccttgaccactcattc 3160
Query: 301 tctctgtcaagtaaaaaaaaataaaaacgaaccttacataatttgaatccaagcaccggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3159 tctctgtcaagtaaaaaaaaataaaaacgaaccttacataatttgaatccaagcaccggt 3100
Query: 361 caattactgctcaatatatgtcttttcgatgcgcattggcagtgcatagtttttttacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3099 caattactgctcaatatatgtcttttcgatgcgcattggcagtgcatagtttttttacat 3040
Query: 421 ttcaaataagactactgctaagtagcgggaaccttcgatagacaaaactgagaaaaaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3039 ttcaaataagactactgctaagtagcgggaaccttcgatagacaaaactgagaaaaaaag 2980
Query: 481 agtgaaacagaaaacatatcgtcaagtttaatacttataaaatttggcgctcgcttccta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2979 agtgaaacagaaaacatatcgtcaagtttaatacttataaaatttggcgctcgcttccta 2920
Query: 541 gtataagcctcgaagaaaattgtaacacagagccgagaatttgttgtgatttcgcaactc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2919 gtataagcctcgaagaaaattgtaacacagagccgagaatttgttgtgatttcgcaactc 2860
Query: 601 atcggcttttttatcaagcgaatgtgtctccagactggaaaatttagaaatttgaaaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2859 atcggcttttttatcaagcgaatgtgtctccagactggaaaatttagaaatttgaaaaat 2800
Query: 661 atcaaaaaaaaaaaatgaaataaaagaaaatgaatcctgaaatatatatatttatwgttg 720
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2799 atc-aaaaaaaaaaatgaaataaaagaaaatgaatcctgaaatatatatatttatagttg 2741
Query: 721 ttaattatacaattacaaagctcaagaacaaggagcaaaaccaatacaaccgctgaaaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2740 ttaattatacaattacaaagctcaagaacaaggagcaaaaccaatacaaccgctgaaaaa 2681
Query: 781 gacaagtataaagagtgtgtttaattgcaacaaacaagatcgtttcggtgtgctttattc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2680 gacaagtataaagagtgtgtttaattgcaacaaacaagatcgtttcggtgtgctttattc 2621
Query: 841 gataacgttcgtattgaataaagcgggtctatctggtgtttttttgcttgggttttttag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2620 gataacgttcgtattgaataaagcgggtctatctggtgtttttttgcttgggttttttag 2561
Query: 901 tcc 903
|||
Sbjct: 2560 tcc 2558
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,247
Number of Sequences: 1807
Number of extensions: 16247
Number of successful extensions: 257
Number of sequences better than 1.0e-20: 1
length of query: 903
length of database: 10,358,551
effective HSP length: 16
effective length of query: 887
effective length of database: 10,329,639
effective search space: 9162389793
effective search space used: 9162389793
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)